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Contact



Programming Languages

Expertise: R and Rstudio, Python, Git, Bash, C++, C#
Familiarity: MySQL, HTML, PHP, Perl


Languages

Spanish - Native
English - Proficient
French - Intermediate

Disclaimer

Made with the R package pagedown.

The source code is available on github.com/SophSM/CV.

Last updated on 2023-12-18.

Main

Sofía Salazar Magaña

Senior undergraduate student of Genomic Sciences. Interested in AI applications in the analysis of genome data and its harmonization with bioinformatic techniques

Education

B.Sc.,Genomic Sciences

National School of Superior Studies (ENES) Juriquilla, National Autonomous University of Mexico (UNAM)

Querétaro, México

September 2020 - Present

  • Grade: 9.88/10

High School Diploma

Monterrey Institute of Technology and Higher Education (ITESM)

Morelia, México

May 2017 - May 2020

  • Grade: 9.69/10

Research Experience

Undergraduate Researcher

Im Lab, The University of Chicago

Remotely

September 2023 - Present

  • Hae Kyung Im, PhD
  • Conducted performance testing and workflow assembly for deep-learning software designed to predict genomic features.

Undergraduate Researcher

RegGenoLab, International Laboratory for Human Genome Research (LIIGH), National Autonomous University of Mexico (UNAM)

Querétaro, México

January 2022 - August 2023

  • Alejandra Medina-Rivera, PhD
  • Assembled a bioinformatic pipeline for analysis of RNA-seq data and and conducted differential expression analysis across multiple datasets of Lupus patients and unaffected controls




Teaching Experience

Guest lecturer at bioinformatics institutional course

Bioinformatic Fridays 2023 course, International Laboratory for Human Genome Research (LIIGH)

Querétaro, México

2023

  • Lectured on introduction to R lenguage usage for data analysis
  • Undergraduate to graduate level class

Guest Lecturer at RNA-seq analysis workshop

International Laboratory for Human Genome Research (LIIGH)

Querétaro, México

2023

  • Lectured on RNA-seq analysis workflow using STAR and R
  • Graduate level class

Posters

Academic Days at LIIGH Symposium

Poster

Querétaro, México

February 2023

  • Lupus peripheral blood meta-analysis with Recount3 & Recount3-like processed RNA-seq data

ISCB-LA SoIBio BioNetMX International Conference on Bioinformatics 2022

Poster

Querétaro, México

November 2022

  • Lupus peripheral blood meta-analysis with Recount3 & Recount3-like processed RNA-seq data

Courses

Workshop: Analysis of biological and biomedical transcriptomic data using Artificial Intelligence (AI) and Machine Learning (ML) methods with R

ISCB-LA SoIBio BioNetMX International Conference on Bioinformatics 2022

Querétaro, México

November 2022

  • Multiple Instructors

Introduction to the logical modeling of cellular networks, with applications to cancer and immunology.

International Laboratory for Human Genome Research (LIIGH)

Querétaro, México

January 2022

  • Main instructor: Denis Thieffry, PhD, (ENS, Paris)

Academic Writing in English course

National School of Superior Studies (ENES) Juriquilla, National Autonomous University of Mexico (UNAM)

Querétaro, México

November 2021

  • Main instructor: M.S. José Antonio Alonso-Pavón